PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985110.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 307aa MW: 34973.1 Da PI: 5.4303

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985110.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.3e-15	3	48	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46 +g+WT+eEde+lv++v+++G+++W++ r g + Rt+k+c++rw + XP_022985110.1 3 KGPWTAEEDEILVNYVNKFGPRDWSS-LRSKGlLPRTGKSCRLRWVN 48 79**********************.66667788********87 PP
2	Myb_DNA-binding	41.9	2.3e-13	59	100	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++eE+ +++ +q+G++ W++Ia ++ gRt++++k++w + XP_022985110.1 59 KFSAEEERVVIELQAQFGNK-WAKIATYLE-GRTDNDVKNFWST 100 79****************.*****.*********65 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MKKGPWTAEE DEILVNYVNK FGPRDWSSLR SKGLLPRTGK SCRLRWVNRL QPNLKTGCKF 60 SAEEERVVIE LQAQFGNKWA KIATYLEGRT DNDVKNFWST RRKRLERILQ IPPQKSQKNK 120 QRSLEPQGLY ELPALEVPSS SSSQLDEQSS TWKDHLENAF QLGNSEMHKT TSLSVQSNML 180 TMENENQVFG TPSTHMLAAP FDPFSHCCIS QFTHSSQEIG MFPDCHGLAP NHAPFNLQDV 240 FEPGEPSETN SSLKFISSSM PKEQEMKAES NLEVKNENSY HATADDCFDD FTADLFDFFD 300 QPPPSLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	3e-63	MYB family protein