PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984058.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 318aa    MW: 35234.9 Da    PI: 4.4542
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.3e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWTteEd++l++++   G g+W++ ++  g+ R++k+c++rw +yl
   XP_022984058.1 14 KGRWTTEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding48.32.4e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++E++ ++++++ lG++ W++Ia+++  gRt++++k++w+++l
   XP_022984058.1  67 RGNITPQEEDVIIKLHASLGNR-WSLIASHLT-GRTDNEIKNYWNSHL 112
                      7999******************.********9.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGRRPCCEKV GLKKGRWTTE EDDRLKKYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRSDLKRGNI TPQEEDVIIK LHASLGNRWS LIASHLTGRT DNEIKNYWNS HLSRQIQTFR  120
RRNDDVPVIV DEAKLSLLQR RKGGRGRRSK AEVEAEVGRK ILPMPDLERE SSVCGAVDDT  180
TEERGSPNEE TVDDPAEGRH DVGGGSVSLD FNEDVFEEDD MSLDLSELLT NVEVEWNDDA  240
AGTCESNTAT VAVVDAGTAE MELGGECSSV SSSFSLDSPW NWESFAGGHE WDAVEFDAGD  300
DFAGGAAEPD AVISWLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.18e-68MYB family protein