PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022983893.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 30536.5 Da PI: 8.407 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.4 | 2.8e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v +G g+W++++++ g++R++k+c++rw +yl XP_022983893.1 14 RGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.4e-15 | 69 | 110 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E++l++++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022983893.1 69 SFTPQEEDLIIKLHQAIGSR-WSVIAKQLP-GRTDNDVKNYWNT 110 79******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MGKPPCCDKS NVKRGLWTAE EDAKILAYVS NHGVGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLRHDSF TPQEEDLIIK LHQAIGSRWS VIAKQLPGRT DNDVKNYWNT KLRKKLSKMG 120 IDPITHKPFS QILFDYGSIS SLPATPKPPL IGPFNKTLNP TTTTTMAKTQ QPFSSGAYLG 180 QQFQFQTPKK PQFFNEQPTT SSCSSSSING GEGLFHFAAS SSCCSEQRNG IEPFSQQCEG 240 SSSDSSFDSF VDALLVQDCE IKGSFPEILD GCFDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 2e-78 | MYB family protein |