PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983640.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 367aa MW: 40793.5 Da PI: 8.3504

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	180	233	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022983640.1 180 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 233 8****************************************************7 PP
2	Myb_DNA-binding	48.7	1.8e-15	181	232	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022983640.1 181 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 232 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSIR TLSHGFPQTS FDLLIQRNDP 60 RARTELSLGS NNSNSLSGVP LDTPTRPPHL RGLSMFDVSS DGLQPIKGIP VYYNRPFPFL 120 GVDQKDQYFH HQFPSPCFFP NYSNSNGIVQ MGYHHRGIGG NNSSSRFLQK LPAKRSMRSP 180 RMRWTTSLHA RFVHAVEHLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVRTTDKP 240 AASSGQSDGS GEDEVSPTLG TTSGDHGPKQ FSDQRASPDR SSQQSPDLEF GSSTLWSNSS 300 RDVWAQTNAN EMDVIRPSLY TPMKMQQKCM HQIQECDSGA MKRYSSECNK PSLEFRLGRA 360 EWDVKEH

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSIR TLSHGFPQTS FDLLIQRNDP  60
RARTELSLGS NNSNSLSGVP LDTPTRPPHL RGLSMFDVSS DGLQPIKGIP VYYNRPFPFL  120
GVDQKDQYFH HQFPSPCFFP NYSNSNGIVQ MGYHHRGIGG NNSSSRFLQK LPAKRSMRSP  180
RMRWTTSLHA RFVHAVEHLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVRTTDKP  240
AASSGQSDGS GEDEVSPTLG TTSGDHGPKQ FSDQRASPDR SSQQSPDLEF GSSTLWSNSS  300
RDVWAQTNAN EMDVIRPSLY TPMKMQQKCM HQIQECDSGA MKRYSSECNK PSLEFRLGRA  360
EWDVKEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-60	G2-like family protein