PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983442.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 380aa MW: 43135.2 Da PI: 9.9139

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.7e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++I+++mg ++R +k+c +rw +yl XP_022983442.1 4 RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGkpLHRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	32.3	2.4e-10	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ +++E+ l + + +++G++ Wk+Ia++++ gRt+k + +w + XP_022983442.1 59 KGSLSPDEQTLVISLQAKYGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 57789***************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MKDRQRWQPE EDALLRAYVK QYGPKEWNLI SQRMGKPLHR DPKSCLERWK NYLKPGLKKG 60 SLSPDEQTLV ISLQAKYGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQLKQ LQKTQNLTQR 120 HDYQNSDGNI PIVGVSSPEK AVQGPYDHIL ETFAEKYVQP KIYAAAFQSP PPPPPPPRLS 180 VPEADPVLSL GSVSSTTSSP TVLPLWMNAN STSTASSSTV STTPSPSVSL TLSPSEPAIN 240 ETEVNRILPV QQMGALVQYC KDLEEGRQSW VQHKKEATWR LNRLEKQLES EKARKKREKM 300 EEMEAKIQRL REEESAYLGR IESDYREQLS ALQRDADSKE AKLVESWCSK HAKLAKLVEK 360 YGVQGHGLVM VTGNSKDIVH

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MKDRQRWQPE EDALLRAYVK QYGPKEWNLI SQRMGKPLHR DPKSCLERWK NYLKPGLKKG  60
SLSPDEQTLV ISLQAKYGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQLKQ LQKTQNLTQR  120
HDYQNSDGNI PIVGVSSPEK AVQGPYDHIL ETFAEKYVQP KIYAAAFQSP PPPPPPPRLS  180
VPEADPVLSL GSVSSTTSSP TVLPLWMNAN STSTASSSTV STTPSPSVSL TLSPSEPAIN  240
ETEVNRILPV QQMGALVQYC KDLEEGRQSW VQHKKEATWR LNRLEKQLES EKARKKREKM  300
EEMEAKIQRL REEESAYLGR IESDYREQLS ALQRDADSKE AKLVESWCSK HAKLAKLVEK  360
YGVQGHGLVM VTGNSKDIVH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	299	RKKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	5e-59	MYB family protein