PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022983423.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 211aa MW: 24510.3 Da PI: 8.4972 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.6 | 5.8e-18 | 7 | 54 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++v+++G g+W+++a+ g++Rt+k+c++rw++yl XP_022983423.1 7 KGSWTADEDSLLSHYVTLHGEGHWNSVAHSTGLKRTGKSCRLRWLNYL 54 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 42.2 | 1.9e-13 | 60 | 103 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++ +++++ ++G++ W++Iar ++ Rt++++k++w++ XP_022983423.1 60 RGNITLQEQLVILQLHSRWGNR-WSKIARFLP-ERTDNEIKNYWRT 103 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MANHVKKGSW TADEDSLLSH YVTLHGEGHW NSVAHSTGLK RTGKSCRLRW LNYLRPNVRR 60 GNITLQEQLV ILQLHSRWGN RWSKIARFLP ERTDNEIKNY WRTRVQKQAK QLKCDVNSKR 120 FRDTMRLVWI PRLVERIAAT SGQSLPACTE TSTSTPTISE STWDDNSVNA DTSGWGDGFE 180 AGWWEEDGVE SSFESLWTEE NIRFLQQQLF D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 2e-74 | MYB family protein |