PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982847.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 773aa MW: 85700.2 Da PI: 6.9248

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022982847.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MQTDLIVASN SETHLHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRLLQG ENCPPPVANG 180 VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ 240 RRKSEGGVSS AAYKKWEKAA IAGVSLVADA AEHLERTVTD MDVLRDQTTL GKKNTDPAGS 300 PLLLLPSLQP NSLIDVASTK LKLQLFPVDD GTRRALELDK HNPHLELTLS TRKKISSVLE 360 HLSRKWGNSS AAHGELMLFP YSIQRKSLAD CQRWAQDSFE SAGDVYATIG RPQVFRLRYG 420 WCSNEEHGSV ELQTSVPAYC IQDDHVMDSR DIEGRIVDVA SIDAQPVNFN KNEVGTLSKN 480 MSTPTAPSET ERSISARPND DLPKSSNPAL NMSWDKKNVA DTTIIQRSED VDDLKSSNGT 540 SLSAGEWADS LTNISIGDLL SGVSQDVDAN CVVTPLAEGT QCLQQIPFSC DSFDAAIAAH 600 ISRQQYKTVS HPTLVPHASS ILDAEETCDA FSFQKNSVIL QDVSSSFTFS SARGCKHIAR 660 TNSMGSSHMT EDLPRSECSP SEDHIQGDPK DEYQANPQIL ETNNIDELAD IYWPDSLGPL 720 DLDFPQTNKY HNEELILGDS LSSLNRLIAS SLDAFQSCSF FGFDKKEPSA FNS

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MQTDLIVASN SETHLHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRLLQG ENCPPPVANG  180
VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ  240
RRKSEGGVSS AAYKKWEKAA IAGVSLVADA AEHLERTVTD MDVLRDQTTL GKKNTDPAGS  300
PLLLLPSLQP NSLIDVASTK LKLQLFPVDD GTRRALELDK HNPHLELTLS TRKKISSVLE  360
HLSRKWGNSS AAHGELMLFP YSIQRKSLAD CQRWAQDSFE SAGDVYATIG RPQVFRLRYG  420
WCSNEEHGSV ELQTSVPAYC IQDDHVMDSR DIEGRIVDVA SIDAQPVNFN KNEVGTLSKN  480
MSTPTAPSET ERSISARPND DLPKSSNPAL NMSWDKKNVA DTTIIQRSED VDDLKSSNGT  540
SLSAGEWADS LTNISIGDLL SGVSQDVDAN CVVTPLAEGT QCLQQIPFSC DSFDAAIAAH  600
ISRQQYKTVS HPTLVPHASS ILDAEETCDA FSFQKNSVIL QDVSSSFTFS SARGCKHIAR  660
TNSMGSSHMT EDLPRSECSP SEDHIQGDPK DEYQANPQIL ETNNIDELAD IYWPDSLGPL  720
DLDFPQTNKY HNEELILGDS LSSLNRLIAS SLDAFQSCSF FGFDKKEPSA FNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein