PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982559.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 285aa    MW: 32253 Da    PI: 4.7124
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.76.3e-2169122356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q++ Le+ F +++++  e++ +LAkklgL+ rqV vWFqNrRa++k
  XP_022982559.1  69 KKRRLTHDQVQMLEKSFDEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 122
                     56789************************************************9 PP
2HD-ZIP_I/II131.82.7e-4268160193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrl+++qv++LE+sF+ee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l ++ +++ ke+++L++++++
  XP_022982559.1  68 EKKRRLTHDQVQMLEKSFDEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLLSNYDSVIKENADLKSQVAS 160
                     69**************************************************************************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MESGRFLFNP RPCGGNMLYL GGAGGDPVLR GGRTMISMTM HESPKGRPFF QSPDDLYDDE  60
YYDEFYPEKK RRLTHDQVQM LEKSFDEENK LEPERKSQLA KKLGLQPRQV AVWFQNRRAR  120
WKTKQLERDY DVLKASYDLL LSNYDSVIKE NADLKSQVAS LTEKCLAKEL DGGEAPIPCV  180
TSEPLLADIG NVSTPHSSRK AEDRLSSGSD GSTVIDDNCR QLIDCCDSYF PSNEYLQCAP  240
LPNGLQMEHD NSNNNSNYLF SDMFAVTGQQ NQEGLGGPPA WWTWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117125RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-81HD-ZIP family protein