PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982532.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 230aa MW: 26219.4 Da PI: 9.7621

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g W++eEd+ll +v+++G ++W+ I + + gR++k+c++rw++ XP_022982532.1 12 KGQWSPEEDQLLRILVQRYGARNWSVIGQSIH-GRSGKSCRLRWFNQ 57 799***************************.*********996 PP
2	Myb_DNA-binding	63.4	4.4e-20	64	108	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEde +v+a++++G++ W+tIar ++ gRt++ +k++w++ XP_022982532.1 64 RQAFTAEEDEVIVEAHAKHGNK-WATIARLLN-GRTDNAIKNHWNST 108 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MTSEEWDIDR VKGQWSPEED QLLRILVQRY GARNWSVIGQ SIHGRSGKSC RLRWFNQLCP 60 DVERQAFTAE EDEVIVEAHA KHGNKWATIA RLLNGRTDNA IKNHWNSTLK RKFSSIAEIK 120 TECTSHGSTI SIGNQCLSSS RSDTNDSIPS QNKRPSTRLS LSLPGTESSP PRQQQQSISS 180 LPEEAKAKSA RCGKEFLSVM QLMIKEEVRN YIAEYRKRQR MSEKEDRKAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-58	MYB family protein