PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982368.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 400aa MW: 43054.9 Da PI: 5.9417

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	3.8e-10	238	286	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_022982368.1 238 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 286 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS 60 SHRDFSNSFP IGLENHHGGG SGTSQTVQYP TDLEMGTKLP CFGSGNYSDM FGSFGLADQI 120 LGGCSSSYRN GGTANTAQTS QETLPPPSGE ESALGSPNGK IRKRALDSAF PFSSNTKSEG 180 KLKKDVSGES SSTQEEKNPV MEQNLRTGKQ AKEKSSNSGE APKENYIHVR ARRGQATNSH 240 SLAERVRREK ISERMRLLQE LVPGCNKITG KAVMLDEIIN YVQSLQQQVE FLSMKLATVN 300 PDMNIDLERI LSKDVRGSNG SVLGFDHPGM SAAPPVVPAH RMFQFQGMMS NMASTSTSTQ 360 FPSLPQTMLE SDIQTLLQMG FDSGSAIDNL GPNGRLKAER

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS  60
SHRDFSNSFP IGLENHHGGG SGTSQTVQYP TDLEMGTKLP CFGSGNYSDM FGSFGLADQI  120
LGGCSSSYRN GGTANTAQTS QETLPPPSGE ESALGSPNGK IRKRALDSAF PFSSNTKSEG  180
KLKKDVSGES SSTQEEKNPV MEQNLRTGKQ AKEKSSNSGE APKENYIHVR ARRGQATNSH  240
SLAERVRREK ISERMRLLQE LVPGCNKITG KAVMLDEIIN YVQSLQQQVE FLSMKLATVN  300
PDMNIDLERI LSKDVRGSNG SVLGFDHPGM SAAPPVVPAH RMFQFQGMMS NMASTSTSTQ  360
FPSLPQTMLE SDIQTLLQMG FDSGSAIDNL GPNGRLKAER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-75	bHLH family protein