PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022982283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 226aa MW: 24770.4 Da PI: 8.8522 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.2 | 3.8e-18 | 39 | 84 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022982283.1 39 KGPWSAEEDRVLTRLVERYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 84 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.7e-17 | 93 | 135 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a+ ++G++ W+tIar ++ gRt++ +k++w++ XP_022982283.1 93 PFSPAEDEAIIAAHSRYGNR-WATIARLLP-GRTDNAVKNHWNST 135 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 226 aa Download sequence |
MSIHHSSSSP STSESSSDDS SLSGKLQPSR NSGDADKIKG PWSAEEDRVL TRLVERYGPR 60 NWSLISRYVK GRSGKSCRLR WCNQLCPGVE HRPFSPAEDE AIIAAHSRYG NRWATIARLL 120 PGRTDNAVKN HWNSTLKRRV RDQGKSAVDH SSDIVGGGSL VAVDDDPLTA LTLATPGIVA 180 GGDVAAASNR RSESLPSGFW EAMRDVVARE VREYMTTTFS ENRGFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G67300.1 | 2e-58 | MYB family protein |