PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982277.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 287aa    MW: 31833.9 Da    PI: 8.7234
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.11.2e-191459147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEdell ++v+ +G ++W++I++ ++ gR++k+c++rw + 
   XP_022982277.1 14 KGPWSPEEDELLRRLVHSYGARNWSLISKSIP-GRSGKSCRLRWCNQ 59
                     79******************************.***********985 PP
2Myb_DNA-binding48.61.8e-1568110347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+ Ed+ +++a+ ++G++ W++Iar ++ gRt++ +k++w++ 
   XP_022982277.1  68 PFTPYEDDTIIQAHSRFGNK-WAAIARLLN-GRTDNAIKNHWNST 110
                      79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MATAGASKPV DRIKGPWSPE EDELLRRLVH SYGARNWSLI SKSIPGRSGK SCRLRWCNQL  60
SPEVEHHPFT PYEDDTIIQA HSRFGNKWAA IARLLNGRTD NAIKNHWNST LKRKYSSSIA  120
DDFKHHPPKR SASVGAAPTT VASPFYFNHS SPSDSDLSDS SLLGMSSSQV CKSVSPDALI  180
SRSDQPPMET STDPLTSLTL CPPGSDSSEV PKLASEPDQA PQQPVQSADK LRIESKFFSS  240
EFLAVMQEMI RKEVHNYMSG MEQKGLCLQT EAIRNAIVKR IVINKRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-69MYB family protein