PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981928.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 271aa    MW: 31330 Da    PI: 7.9114
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.82.4e-5481361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv +yL++k++++k++l +vi ++d+yk+ePwd++ + k+   e+kewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_022981928.1   8 VPPGFRFHPTDEELVGYYLERKINAQKIDL-DVIIDIDLYKMEPWDIEgNcKFGLeEQKEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKAV 101
                     69****************************.99**************943433333677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++++g++ktLvfy grap+g+ktdW+mheyrl
  XP_022981928.1 102 VS-KNRVIGMRKTLVFYIGRAPNGRKTDWIMHEYRL 136
                     **.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MENLESCVPP GFRFHPTDEE LVGYYLERKI NAQKIDLDVI IDIDLYKMEP WDIEGNCKFG  60
LEEQKEWYFF SHKDRKYPTG SRTNRATSAG FWKATGRDKA VVSKNRVIGM RKTLVFYIGR  120
APNGRKTDWI MHEYRLQTSQ LAPTQEEGWV VCKAFKKPNP NQSQGIGGWN NNGYHNQNQG  180
YYDLKNNAQF VRSPSFSDGM TPTHMLNSSC LEYQHFVPNN NHSSCFDINQ LIQLPSLESP  240
TLSPSFDTNE KKRNHDVTSP SSSYPNFFPN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.13e-92NAC family protein