PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981873.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 297aa MW: 32894.4 Da PI: 6.8341

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	206.5	7.1e-64	90	230	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 g+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqq +++ + ++ ++ ++k +re+ + +++ a+ + XP_022981873.1 90 GGGINCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRQQQFRPDQF--DQTTHKCHRET---------QPSIPPATVT 173 5789*********************************************999987766644..33444444443.........4455666666 PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + le +++P+e +s+avfrcv+vs++d+ ee+laYqtav+igGh+fkGiLyd+G+e+ XP_022981873.1 174 SGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPET 230 778999***********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MTGLLYLGGK QEDDQEQRGR EQQLFLYNSR NNEEIYSKGL EIWPQYGQQH QAVENYISFG 60 VGPSRMNLMI NASDHEFTMM RQGAATGGGG GGINCQDCGN QAKKDCSHLR CRTCCKSRGF 120 QCQTHVKSTW VPAAKRRERQ QQRQQQFRPD QFDQTTHKCH RETQPSIPPA TVTSGLELAH 180 FPAEFNSPAV FRCVKVSAID NVEEQLAYQT AVNIGGHMFK GILYDHGPET SQNLSTGGES 240 SYSHGGDDDG QGLDLVIGAS NSFGRVNPSA SFVESSLYPI PINTFTPGMQ NFPSSRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	6e-59	SRS family protein