PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981711.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 273aa MW: 30947.1 Da PI: 8.7139

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.8	3.1e-51	17	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeel+ +yL++kv++k++ + e+ik++diyk++PwdLpk + +ekewyfF++r +ky+++ r+nr+t sg+Wkatg dk+++s+ XP_022981711.1 17 MLPGFRFHPTDEELIGFYLRRKVKKKPIAI-EIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFST 110 579*************************.89***********8888899***********************************9 PP NAM 96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_022981711.1 111 lkpNQECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 146 9888999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEVPSKLVDV EEEDEVMLPG FRFHPTDEEL IGFYLRRKVK KKPIAIEIIK QLDIYKYDPW 60 DLPKVSNVGE KEWYFFCTRG RKYRNSIRPN RVTGSGFWKA TGIDKSIFST LKPNQECIGL 120 KKSLVYYRGS AGKGTKTDWM MHEFRLPSNT NSPEQYHEEV WTLCRIFRRI PSIRKYSPII 180 SPIPQNPNNN SFPTLIDLET KPNPSLTLPY DSFEPSSLYP SSFWNGVDGG GGGGGRDGGG 240 GGGDVFTSGG WNELQLVVQM SPSTPFSIFR GLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	242	GGGGRDGGGGG
2	233	243	GGGGRDGGGGG
3	234	244	GGGGRDGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-87	NAC family protein