PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981410.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 641aa MW: 72008 Da PI: 6.0476

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	90.9	1.4e-28	71	155	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r+++ k+plWe+vs+k+ e g++rs+k+Ckek+en+ k++k++ke + + +++s+++++f+qlea XP_022981410.1 71 RWPRQETLALLKIRSEMDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRCG--KPDSKSYKFFEQLEA 155 8******************************************************************9..588889*****85 PP
2	trihelix	102.4	3.4e-32	453	538	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r++++ +++++ k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+k+++k r +e+s+tcpyf+ql+a XP_022981410.1 453 RWPKVEVEALIKLRTNLDAKYQENGPKGPLWEEISSAMKRLGYNRNAKRCKEKWENINKYFKKVKDTKKTR-PEDSKTCPYFHQLDA 538 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MLGNSTTSVL GGGAGEDSAV PETTNHQDGL MDDVGESGAV TAEDNNKTSG EDERGRSGEG 60 DNGDRSFGGN RWPRQETLAL LKIRSEMDVA FRDASVKGPL WEQVSRKLGE LGYHRSAKKC 120 KEKFENVYKY HKRTKEVRCG KPDSKSYKFF EQLEALENHP PLNFHSHLSK TPPPATAASP 180 PTTVISHIPS TVPSTTTAVP HLMNISFTQP NPTIHLQSMP PPPPLSFNNP TSLATTIAPL 240 FQTNVSSGAA GLGFEADLIS NSSSDDVNSS TSSDEASRQR KKRKWKDFFE RLMREVIERQ 300 EEMQKRFLEA IEKREQERVA REEAWRMQEM AKINREKEIL AQERSMAAAK DAAITSFLQK 360 LTQSHHNDNN PSPSPSPPPP PPPPPRQQPI SISNPTAVVQ PPPQQASTLQ VVHPNSTPQK 420 LVNNNEYLHM EIVKRSDNGG ESYRMSPASS SSRWPKVEVE ALIKLRTNLD AKYQENGPKG 480 PLWEEISSAM KRLGYNRNAK RCKEKWENIN KYFKKVKDTK KTRPEDSKTC PYFHQLDALY 540 KEKNINNNNN GNKFDNVIIG SSTQIMPHQQ QPLMVRPEQQ WPPQQELVRS NSANKDMESE 600 PMDRDEKDED DDEDDDEEED EEGGENYEIV ASKPASMSVA E

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MLGNSTTSVL GGGAGEDSAV PETTNHQDGL MDDVGESGAV TAEDNNKTSG EDERGRSGEG  60
DNGDRSFGGN RWPRQETLAL LKIRSEMDVA FRDASVKGPL WEQVSRKLGE LGYHRSAKKC  120
KEKFENVYKY HKRTKEVRCG KPDSKSYKFF EQLEALENHP PLNFHSHLSK TPPPATAASP  180
PTTVISHIPS TVPSTTTAVP HLMNISFTQP NPTIHLQSMP PPPPLSFNNP TSLATTIAPL  240
FQTNVSSGAA GLGFEADLIS NSSSDDVNSS TSSDEASRQR KKRKWKDFFE RLMREVIERQ  300
EEMQKRFLEA IEKREQERVA REEAWRMQEM AKINREKEIL AQERSMAAAK DAAITSFLQK  360
LTQSHHNDNN PSPSPSPPPP PPPPPRQQPI SISNPTAVVQ PPPQQASTLQ VVHPNSTPQK  420
LVNNNEYLHM EIVKRSDNGG ESYRMSPASS SSRWPKVEVE ALIKLRTNLD AKYQENGPKG  480
PLWEEISSAM KRLGYNRNAK RCKEKWENIN KYFKKVKDTK KTRPEDSKTC PYFHQLDALY  540
KEKNINNNNN GNKFDNVIIG SSTQIMPHQQ QPLMVRPEQQ WPPQQELVRS NSANKDMESE  600
PMDRDEKDED DDEDDDEEED EEGGENYEIV ASKPASMSVA E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	6e-72	Trihelix family protein