PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022980366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 299aa MW: 33773.8 Da PI: 5.9364 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell++++k+ g+ +W++ ++ g+ R++k+c++rw +yl XP_022980366.1 14 KGPWTSEEDELLINYIKKNNGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62 79****************98888**********99************97 PP | |||||||
2 | Myb_DNA-binding | 50.6 | 4.4e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_022980366.1 68 RGPFTPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGRTPCCDKK GLKKGPWTSE EDELLINYIK KNNGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTPEEEKLVI QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLLCI 120 GIDPQTHEPF NSRCSSSTAP ASPTTRHMAQ WESARLEAEA RLSRESSLFT PLPMETTTDS 180 DFFLQIWNSE VGDSFRKCRE DKTTCHSQSS LSSSIKCESV YIVATHNGVD YTGSSAMESN 240 ENEETEYKNF KSMADIVMSK SDSSSANEFE ESSDSALELL LDFPINNDMS FLEENNMNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-108 | MYB family protein |