PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979903.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 275aa    MW: 31613.8 Da    PI: 6.7884
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.17e-29111198291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_022979903.1 111 FYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 198
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGCGSECFWW VIVKFHALLC FFVWEIVEFG VDGDSEVVGN STLVDRKPLD ENETGVSSIE  60
RIFDEDGDEK IIQDSSGRNA ILDSVPGLPV VQADEPYVGQ EFENEAAAHA FYNAYATRVG  120
FVIRVSKLSR SRRDGTAIGR ALVCNKEGYR MPDKREKIVR QRAETRVGCR AMILVRKVNS  180
GKWVVTKFVK EHTHPLSPGK GRRDCIYDQY PNEHDKIREL SQQLAIEKKR SATYKRHLEV  240
IFEYIDEHND NLSRKIQHIV DNVKEMESIE QQNHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-96FAR1 family protein