PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979687.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 865aa MW: 95763.9 Da PI: 6.8276

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	55.5	1.1e-17	4	45	76	117
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 g+v+vl+cyYah+e+n +fqrr+yw+L+e+le+ivlvhy+ev XP_022979687.1 4 GSVDVLHCYYAHGEDNDNFQRRSYWMLDEQLEHIVLVHYREV 45 579*************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence
MVSGSVDVLH CYYAHGEDND NFQRRSYWML DEQLEHIVLV HYREVNEGHR SGVSRVSVDP 60 GSLAEGCQGG STPIFMQETS LVGSVHTSSP LSPMQTVRSE NGGVDSSARN DSGISSDDHH 120 VFKSSMLPAS LPAGDVSGSS DLCGQEIVII QSAITDSITH KLIDARLASS GLVKNMVNSG 180 HGLIADAEVP AAKAVSQRIV QKKKHGLITV PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE 240 GFGELKKLDS FGRWMDKEIG RDCDDSLMTL DSGNYWCALD AGNDEKEVSS LSHHMQLDID 300 SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV LIVGSFLGSK KLPVETQWGC MFGEVEVSAE 360 ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA CSEVREFEFR EKPPTLSVPN AIKCASEDEL 420 RFQMRLTRLL NLCLEEKWLD CSIKNCEKCK IIGLIKSSRS NIAKWRMMEG ISIPLISDGM 480 NPRDFIIQSL LVDKLCEWLA CKVHEGTMGT HVLDEEGLGV IHLAAALGYA WTIGPIIASG 540 VSPNFRDSKG RTALHWASYF GREETVATLV RLGVSPGAVD DPTSGFPGGQ TAADLASSQG 600 HKGIAGYLAE ADLTAHLRSL TDGENLKDNV KENVNVDETI QTADVVSSQL AEDELLSLKG 660 SLAAVRKSVH AAALIHAAFR ARSFRQKQLM GSDKEMIHEE SVDLVALGIL HKAEKIHYED 720 YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV KIQAHVRGHQ VRKLYRKVIW TVSIVEKAIL 780 RWRRKRVGLR GFKAEGATGE VASSHSQVEK SDEYEFLRIG RQLKYADVEK ALSRVKSMAR 840 SPEARHQYMR LVTKFHIFKQ INDEE

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence

MVSGSVDVLH CYYAHGEDND NFQRRSYWML DEQLEHIVLV HYREVNEGHR SGVSRVSVDP  60
GSLAEGCQGG STPIFMQETS LVGSVHTSSP LSPMQTVRSE NGGVDSSARN DSGISSDDHH  120
VFKSSMLPAS LPAGDVSGSS DLCGQEIVII QSAITDSITH KLIDARLASS GLVKNMVNSG  180
HGLIADAEVP AAKAVSQRIV QKKKHGLITV PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE  240
GFGELKKLDS FGRWMDKEIG RDCDDSLMTL DSGNYWCALD AGNDEKEVSS LSHHMQLDID  300
SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV LIVGSFLGSK KLPVETQWGC MFGEVEVSAE  360
ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA CSEVREFEFR EKPPTLSVPN AIKCASEDEL  420
RFQMRLTRLL NLCLEEKWLD CSIKNCEKCK IIGLIKSSRS NIAKWRMMEG ISIPLISDGM  480
NPRDFIIQSL LVDKLCEWLA CKVHEGTMGT HVLDEEGLGV IHLAAALGYA WTIGPIIASG  540
VSPNFRDSKG RTALHWASYF GREETVATLV RLGVSPGAVD DPTSGFPGGQ TAADLASSQG  600
HKGIAGYLAE ADLTAHLRSL TDGENLKDNV KENVNVDETI QTADVVSSQL AEDELLSLKG  660
SLAAVRKSVH AAALIHAAFR ARSFRQKQLM GSDKEMIHEE SVDLVALGIL HKAEKIHYED  720
YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV KIQAHVRGHQ VRKLYRKVIW TVSIVEKAIL  780
RWRRKRVGLR GFKAEGATGE VASSHSQVEK SDEYEFLRIG RQLKYADVEK ALSRVKSMAR  840
SPEARHQYMR LVTKFHIFKQ INDEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	1e-154	CAMTA family protein