PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979686.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 936aa MW: 104467 Da PI: 7.3467

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.1	4.7e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_022979686.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_022979686.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MAENRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGHR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDDHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII 240 QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QVVDDSFVQV 300 EKTSKYDLNH EGFGELKKLD SFGRWMDKEI GRDCDDSLMT LDSGNYWCAL DAGNDEKEVS 360 SLSHHMQLDI DSLGPSLSQD QLFSISDFSP DWAYSGNVTK VLIVGSFLGS KKLPVETQWG 420 CMFGEVEVSA EILSNSVLRC QTPLHAPGRI PFYVTCCNRL ACSEVREFEF REKPPTLSVP 480 NAIKCASEDE LRFQMRLTRL LNLCLEEKWL DCSIKNCEKC KIIGLIKSSR SNIAKWRMME 540 GISIPLISDG MNPRDFIIQS LLVDKLCEWL ACKVHEGTMG THVLDEEGLG VIHLAAALGY 600 AWTIGPIIAS GVSPNFRDSK GRTALHWASY FGREETVATL VRLGVSPGAV DDPTSGFPGG 660 QTAADLASSQ GHKGIAGYLA EADLTAHLRS LTDGENLKDN VKENVNVDET IQTADVVSSQ 720 LAEDELLSLK GSLAAVRKSV HAAALIHAAF RARSFRQKQL MGSDKEMIHE ESVDLVALGI 780 LHKAEKIHYE DYLHVAAVRI QQNYRGWKGR KEFLKIRNRI VKIQAHVRGH QVRKLYRKVI 840 WTVSIVEKAI LRWRRKRVGL RGFKAEGATG EVASSHSQVE KSDEYEFLRI GRQLKYADVE 900 KALSRVKSMA RSPEARHQYM RLVTKFHIFK QINDEE

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MAENRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGHR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDDHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII  240
QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QVVDDSFVQV  300
EKTSKYDLNH EGFGELKKLD SFGRWMDKEI GRDCDDSLMT LDSGNYWCAL DAGNDEKEVS  360
SLSHHMQLDI DSLGPSLSQD QLFSISDFSP DWAYSGNVTK VLIVGSFLGS KKLPVETQWG  420
CMFGEVEVSA EILSNSVLRC QTPLHAPGRI PFYVTCCNRL ACSEVREFEF REKPPTLSVP  480
NAIKCASEDE LRFQMRLTRL LNLCLEEKWL DCSIKNCEKC KIIGLIKSSR SNIAKWRMME  540
GISIPLISDG MNPRDFIIQS LLVDKLCEWL ACKVHEGTMG THVLDEEGLG VIHLAAALGY  600
AWTIGPIIAS GVSPNFRDSK GRTALHWASY FGREETVATL VRLGVSPGAV DDPTSGFPGG  660
QTAADLASSQ GHKGIAGYLA EADLTAHLRS LTDGENLKDN VKENVNVDET IQTADVVSSQ  720
LAEDELLSLK GSLAAVRKSV HAAALIHAAF RARSFRQKQL MGSDKEMIHE ESVDLVALGI  780
LHKAEKIHYE DYLHVAAVRI QQNYRGWKGR KEFLKIRNRI VKIQAHVRGH QVRKLYRKVI  840
WTVSIVEKAI LRWRRKRVGL RGFKAEGATG EVASSHSQVE KSDEYEFLRI GRQLKYADVE  900
KALSRVKSMA RSPEARHQYM RLVTKFHIFK QINDEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein