PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979682.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 955aa MW: 106552 Da PI: 7.5316

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	4.9e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_022979682.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_022979682.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MAENRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGHR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDDHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII 240 QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QKKKHGLITV 300 PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE GFGELKKLDS FGRWMDKEIG RDCDDSLMTL 360 DSGNYWCALD AGNDEKEVSS LSHHMQLDID SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV 420 LIVGSFLGSK KLPVETQWGC MFGEVEVSAE ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA 480 CSEVREFEFR EKPPTLSVPN AIKCASEDEL RFQMRLTRLL NLCLEEKWLD CSIKNCEKCK 540 IIGLIKSSRS NIAKWRMMEG ISIPLISDGM NPRDFIIQSL LVDKLCEWLA CKVHEGTMGT 600 HVLDEEGLGV IHLAAALGYA WTIGPIIASG VSPNFRDSKG RTALHWASYF GREETVATLV 660 RLGVSPGAVD DPTSGFPGGQ TAADLASSQG HKGIAGYLAE ADLTAHLRSL TDGENLKDNV 720 KENVNVDETI QTADVVSSQL AEDELLSLKG SLAAVRKSVH AAALIHAAFR ARSFRQKQLM 780 GSDKEMIHEE SVDLVALGIL HKAEKIHYED YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV 840 KIQAHVRGHQ VRKLYRKVIW TVSIVEKAIL RWRRKRVGLR GFKAEGATGE VASSHSQVEK 900 SDEYEFLRIG RQLKYADVEK ALSRVKSMAR SPEARHQYMR LVTKFHIFKQ INDEE

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MAENRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGHR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDDHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII  240
QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QKKKHGLITV  300
PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE GFGELKKLDS FGRWMDKEIG RDCDDSLMTL  360
DSGNYWCALD AGNDEKEVSS LSHHMQLDID SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV  420
LIVGSFLGSK KLPVETQWGC MFGEVEVSAE ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA  480
CSEVREFEFR EKPPTLSVPN AIKCASEDEL RFQMRLTRLL NLCLEEKWLD CSIKNCEKCK  540
IIGLIKSSRS NIAKWRMMEG ISIPLISDGM NPRDFIIQSL LVDKLCEWLA CKVHEGTMGT  600
HVLDEEGLGV IHLAAALGYA WTIGPIIASG VSPNFRDSKG RTALHWASYF GREETVATLV  660
RLGVSPGAVD DPTSGFPGGQ TAADLASSQG HKGIAGYLAE ADLTAHLRSL TDGENLKDNV  720
KENVNVDETI QTADVVSSQL AEDELLSLKG SLAAVRKSVH AAALIHAAFR ARSFRQKQLM  780
GSDKEMIHEE SVDLVALGIL HKAEKIHYED YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV  840
KIQAHVRGHQ VRKLYRKVIW TVSIVEKAIL RWRRKRVGLR GFKAEGATGE VASSHSQVEK  900
SDEYEFLRIG RQLKYADVEK ALSRVKSMAR SPEARHQYMR LVTKFHIFKQ INDEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein