PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979463.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 647aa MW: 73988.8 Da PI: 8.397

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.6e-07	461	500	3	39
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 +W+++E ell ++ +++++g +W+ I++++g++R+ ++ XP_022979463.1 461 PWSKDEIELLRKGMQKYPKGtsrRWEVISEYIGTKRSVEE 500 8********************************8898876 PP
2	Myb_DNA-binding	26.3	1.7e-08	589	631	3	43
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck + XP_022979463.1 589 DWSAVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKK 631 6******************************.******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MTVLANLRLL TYSDEIVDGQ PIYVSSNCLP IKAFKYEPAG HAFHNAALKL LGCEDEEVSD 60 DNEQTSDDAE QKYAPSFDSY SSKGKKKSGG STQQDHYALL GLSNLRYLAT EEQIRKSYRE 120 TALKYHPDKQ AALLLAEETE AAKQAKKDEI ETHFKLIQEA YEVLIDPVKR RIYDSTDEFD 180 DEVPTDCAPQ DFFKVFGPAF MRNGRWSVNQ SIPSLGDDKT PLKEVDDFYN FWYSFKSWRE 240 FPHTDEFDLE QAESRDHKRW MERQNAKLSE KARKEEYARI RTLVDNAYKR DPRIQRRKEE 300 EKAQKQRKKE AKFLAKKLQE EEAIRLAEDQ KRRKEEEDRR AAEVAQQQKK VKEREKKLLR 360 KERTRLRTLS GPIVSQSLLD LSEEDVENLC SSLDIEQLRS ICDKMEGKTG MELAKVLKDA 420 QECSYSERKQ PEGKKTGHQN GFTSANAGAP LSSSLPKKER PWSKDEIELL RKGMQKYPKG 480 TSRRWEVISE YIGTKRSVEE ILKATKTILL QKPDSSKAFD SFLEKRKPAQ SIASPLSTRE 540 ELVGSSSQKP EDNPATNGNL DTSSSQNVNN QTPNDSSANG VSSSSDQDDW SAVQERALVQ 600 ALKTFPKETS QRWERVAAAV PGKTVNQCKK KITSMKESFR NKKNAAA

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MTVLANLRLL TYSDEIVDGQ PIYVSSNCLP IKAFKYEPAG HAFHNAALKL LGCEDEEVSD  60
DNEQTSDDAE QKYAPSFDSY SSKGKKKSGG STQQDHYALL GLSNLRYLAT EEQIRKSYRE  120
TALKYHPDKQ AALLLAEETE AAKQAKKDEI ETHFKLIQEA YEVLIDPVKR RIYDSTDEFD  180
DEVPTDCAPQ DFFKVFGPAF MRNGRWSVNQ SIPSLGDDKT PLKEVDDFYN FWYSFKSWRE  240
FPHTDEFDLE QAESRDHKRW MERQNAKLSE KARKEEYARI RTLVDNAYKR DPRIQRRKEE  300
EKAQKQRKKE AKFLAKKLQE EEAIRLAEDQ KRRKEEEDRR AAEVAQQQKK VKEREKKLLR  360
KERTRLRTLS GPIVSQSLLD LSEEDVENLC SSLDIEQLRS ICDKMEGKTG MELAKVLKDA  420
QECSYSERKQ PEGKKTGHQN GFTSANAGAP LSSSLPKKER PWSKDEIELL RKGMQKYPKG  480
TSRRWEVISE YIGTKRSVEE ILKATKTILL QKPDSSKAFD SFLEKRKPAQ SIASPLSTRE  540
ELVGSSSQKP EDNPATNGNL DTSSSQNVNN QTPNDSSANG VSSSSDQDDW SAVQERALVQ  600
ALKTFPKETS QRWERVAAAV PGKTVNQCKK KITSMKESFR NKKNAAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein