PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022979431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 647aa MW: 73988.8 Da PI: 8.397 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.6e-07 | 461 | 500 | 3 | 39 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 +W+++E ell ++ +++++g +W+ I++++g++R+ ++ XP_022979431.1 461 PWSKDEIELLRKGMQKYPKGtsrRWEVISEYIGTKRSVEE 500 8********************************8898876 PP | |||||||
2 | Myb_DNA-binding | 26.3 | 1.7e-08 | 589 | 631 | 3 | 43 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck + XP_022979431.1 589 DWSAVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKK 631 6********************************.********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 647 aa Download sequence |
MTVLANLRLL TYSDEIVDGQ PIYVSSNCLP IKAFKYEPAG HAFHNAALKL LGCEDEEVSD 60 DNEQTSDDAE QKYAPSFDSY SSKGKKKSGG STQQDHYALL GLSNLRYLAT EEQIRKSYRE 120 TALKYHPDKQ AALLLAEETE AAKQAKKDEI ETHFKLIQEA YEVLIDPVKR RIYDSTDEFD 180 DEVPTDCAPQ DFFKVFGPAF MRNGRWSVNQ SIPSLGDDKT PLKEVDDFYN FWYSFKSWRE 240 FPHTDEFDLE QAESRDHKRW MERQNAKLSE KARKEEYARI RTLVDNAYKR DPRIQRRKEE 300 EKAQKQRKKE AKFLAKKLQE EEAIRLAEDQ KRRKEEEDRR AAEVAQQQKK VKEREKKLLR 360 KERTRLRTLS GPIVSQSLLD LSEEDVENLC SSLDIEQLRS ICDKMEGKTG MELAKVLKDA 420 QECSYSERKQ PEGKKTGHQN GFTSANAGAP LSSSLPKKER PWSKDEIELL RKGMQKYPKG 480 TSRRWEVISE YIGTKRSVEE ILKATKTILL QKPDSSKAFD SFLEKRKPAQ SIASPLSTRE 540 ELVGSSSQKP EDNPATNGNL DTSSSQNVNN QTPNDSSANG VSSSSDQDDW SAVQERALVQ 600 ALKTFPKETS QRWERVAAAV PGKTVNQCKK KITSMKESFR NKKNAAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |