PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979422.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 672aa MW: 76889.1 Da PI: 8.3946

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	486	525	3	39
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 +W+++E ell ++ +++++g +W+ I++++g++R+ ++ XP_022979422.1 486 PWSKDEIELLRKGMQKYPKGtsrRWEVISEYIGTKRSVEE 525 8********************************8898876 PP
2	Myb_DNA-binding	26.2	1.8e-08	614	656	3	43
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck + XP_022979422.1 614 DWSAVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKK 656 6******************************.******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MARSSDKLRK FFTEYHLGPV DSFDAMTVLA NLRLLTYSDE IVDGQPIYVS SNCLPIKAFK 60 YEPAGHAFHN AALKLLGCED EEVSDDNEQT SDDAEQKYAP SFDSYSSKGK KKSGGSTQQD 120 HYALLGLSNL RYLATEEQIR KSYRETALKY HPDKQAALLL AEETEAAKQA KKDEIETHFK 180 LIQEAYEVLI DPVKRRIYDS TDEFDDEVPT DCAPQDFFKV FGPAFMRNGR WSVNQSIPSL 240 GDDKTPLKEV DDFYNFWYSF KSWREFPHTD EFDLEQAESR DHKRWMERQN AKLSEKARKE 300 EYARIRTLVD NAYKRDPRIQ RRKEEEKAQK QRKKEAKFLA KKLQEEEAIR LAEDQKRRKE 360 EEDRRAAEVA QQQKKVKERE KKLLRKERTR LRTLSGPIVS QSLLDLSEED VENLCSSLDI 420 EQLRSICDKM EGKTGMELAK VLKDAQECSY SERKQPEGKK TGHQNGFTSA NAGAPLSSSL 480 PKKERPWSKD EIELLRKGMQ KYPKGTSRRW EVISEYIGTK RSVEEILKAT KTILLQKPDS 540 SKAFDSFLEK RKPAQSIASP LSTREELVGS SSQKPEDNPA TNGNLDTSSS QNVNNQTPND 600 SSANGVSSSS DQDDWSAVQE RALVQALKTF PKETSQRWER VAAAVPGKTV NQCKKKITSM 660 KESFRNKKNA AA

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MARSSDKLRK FFTEYHLGPV DSFDAMTVLA NLRLLTYSDE IVDGQPIYVS SNCLPIKAFK  60
YEPAGHAFHN AALKLLGCED EEVSDDNEQT SDDAEQKYAP SFDSYSSKGK KKSGGSTQQD  120
HYALLGLSNL RYLATEEQIR KSYRETALKY HPDKQAALLL AEETEAAKQA KKDEIETHFK  180
LIQEAYEVLI DPVKRRIYDS TDEFDDEVPT DCAPQDFFKV FGPAFMRNGR WSVNQSIPSL  240
GDDKTPLKEV DDFYNFWYSF KSWREFPHTD EFDLEQAESR DHKRWMERQN AKLSEKARKE  300
EYARIRTLVD NAYKRDPRIQ RRKEEEKAQK QRKKEAKFLA KKLQEEEAIR LAEDQKRRKE  360
EEDRRAAEVA QQQKKVKERE KKLLRKERTR LRTLSGPIVS QSLLDLSEED VENLCSSLDI  420
EQLRSICDKM EGKTGMELAK VLKDAQECSY SERKQPEGKK TGHQNGFTSA NAGAPLSSSL  480
PKKERPWSKD EIELLRKGMQ KYPKGTSRRW EVISEYIGTK RSVEEILKAT KTILLQKPDS  540
SKAFDSFLEK RKPAQSIASP LSTREELVGS SSQKPEDNPA TNGNLDTSSS QNVNNQTPND  600
SSANGVSSSS DQDDWSAVQE RALVQALKTF PKETSQRWER VAAAVPGKTV NQCKKKITSM  660
KESFRNKKNA AA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein