PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979330.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 684aa    MW: 74911.7 Da    PI: 4.769
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS353.53.3e-1083126842374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+  +s +   a ++L r+ +   ++gdp++R+a+yf eAL++rl+       + +  s +++ ns++ l ++k++++++P+ kf+hl
  XP_022979330.1 312 LKVLLDCARLCDS-EPDSAVKTLDRIGKSLLEHGDPIERVAFYFGEALRNRLSP---AARNNFLDSIETDANSEDFLLSYKALNDACPYSKFAHL 402
                     679******8877.67889999*******************************9...33333434444457799********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+++++++Hi+Df+i qG+QW+aLlqaL++R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +ed
  XP_022979330.1 403 TANQAILEATQRASKIHIVDFGIVQGVQWAALLQALTTRATGKPiKVRISGIPAPSLGesPAASLYATGNRLSEFAKLLELNFEFEP-ILTPIED 496
                     ****************************************88887**********99998999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ ++++++++E+laVn++lql+ llde        ++ L+l kslsP++v++ e ea++n++ F  rf +al+yysa+f+sle +lpr+s er 
  XP_022979330.1 497 LNKSSFSIQSDEVLAVNFMLQLYGLLDEVPVGV---HSALRLAKSLSPNIVTLGEYEASLNRTGFYSRFKNALKYYSAIFESLEPNLPRDSPERL 588
                     **************************6544444...48********************************************************* PP

            GRAS 284 kvErellgreivnvvace...gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                      +E+ l+gr+i  v+ +e   g++rr r+e +e+W++ +e++GF+pv+ls++a +qak ll +++ +  y++ e+  +++ l W+d pL++vS+W
  XP_022979330.1 589 QLEKLLIGRRIAGVIGMEeesGSKRRVRMEDKEEWKNLMESSGFEPVALSHYAISQAKILLWNYNyNSLYSLIESAPEFLsLAWNDVPLLTVSSW 683
                     ***************988223456*****************************************9999***999999999************** PP

            GRAS 374 r 374
                     r
  XP_022979330.1 684 R 684
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MPFRTPLPNS PSSLSRSLSP PPTDLFFPSV PHSLLCVFVS PNFSHFPSLS LCFLLLSCSG  60
NVTRSFLSGF GRARFYCYRL MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QQLCPLTPFS  120
LLPWTTTNSS PTMASSSSSP NLSFGVSGSA FTDPFQVAGD ADSAEPAFHF PNLEHPSAGF  180
RFFPNFGGGE FDSDEWMDSL VGGGDSTDSS TLPSGCDAYA EYGLFGVDLF NGSPSRLVVA  240
SSPPSDFNRA VLPESSCNTS TVPPPPWSSP PPSVKDVRVA NPPAEKLQTN DVVEASSNAP  300
EEVLPSPPPP LLKVLLDCAR LCDSEPDSAV KTLDRIGKSL LEHGDPIERV AFYFGEALRN  360
RLSPAARNNF LDSIETDANS EDFLLSYKAL NDACPYSKFA HLTANQAILE ATQRASKIHI  420
VDFGIVQGVQ WAALLQALTT RATGKPIKVR ISGIPAPSLG ESPAASLYAT GNRLSEFAKL  480
LELNFEFEPI LTPIEDLNKS SFSIQSDEVL AVNFMLQLYG LLDEVPVGVH SALRLAKSLS  540
PNIVTLGEYE ASLNRTGFYS RFKNALKYYS AIFESLEPNL PRDSPERLQL EKLLIGRRIA  600
GVIGMEEESG SKRRVRMEDK EEWKNLMESS GFEPVALSHY AISQAKILLW NYNYNSLYSL  660
IESAPEFLSL AWNDVPLLTV SSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein