PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979004.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 316aa    MW: 34060.4 Da    PI: 7.0125
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF7022335.1e-72912413154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 
                      g++sCqdCGnqakkdCah+RCRtCCksrgf+C+thvkstWvpaakrrerq++laa++++++ +   ++++kr+r+ + +++s+l++t +++++s
  XP_022979004.1  91 GGGISCQDCGNQAKKDCAHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLhGDNNPKRHRDYNPTSSSSLACTLIPNNTS 185
                     5789***************************************************99988777664788899*******************9986 PP

          DUF702  97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                        le+ ++P+e++s+avfrcvrvss d++++++aYqtav+igGhvfkGiLydqG+e+
  XP_022979004.1 186 G--LEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPET 241
                     5..88999************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MSGFFSLGGG GREDHQDHQQ NNDTNPETLF WYKGNVELWQ QQQHHHHPQQ EQPLFQTQSR  60
IPYSAPLPVR TSDESSSRSG NFMMIGSGSG GGGISCQDCG NQAKKDCAHM RCRTCCKSRG  120
FHCETHVKST WVPAAKRRER QEKLAALQTQ HQLHLHGDNN PKRHRDYNPT SSSSLACTLI  180
PNNTSGLEIG NFPAELNSPA VFRCVRVSST DESDDQYAYQ TAVNIGGHVF KGILYDQGPE  240
TNYIPPAETS SGGGGGGGGG SSSGVQPLNF ITGATDATTA SGGSSAALPL LDPSSLYSTP  300
LNSFMAGTQF FLPPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.11e-73SRS family protein