PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022979003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SRS | ||||||||
Protein Properties | Length: 316aa MW: 34060.4 Da PI: 7.0125 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 233 | 5.1e-72 | 91 | 241 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 g++sCqdCGnqakkdCah+RCRtCCksrgf+C+thvkstWvpaakrrerq++laa++++++ + ++++kr+r+ + +++s+l++t +++++s XP_022979003.1 91 GGGISCQDCGNQAKKDCAHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLhGDNNPKRHRDYNPTSSSSLACTLIPNNTS 185 5789***************************************************99988777664788899*******************9986 PP DUF702 97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le+ ++P+e++s+avfrcvrvss d++++++aYqtav+igGhvfkGiLydqG+e+ XP_022979003.1 186 G--LEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPET 241 5..88999************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MSGFFSLGGG GREDHQDHQQ NNDTNPETLF WYKGNVELWQ QQQHHHHPQQ EQPLFQTQSR 60 IPYSAPLPVR TSDESSSRSG NFMMIGSGSG GGGISCQDCG NQAKKDCAHM RCRTCCKSRG 120 FHCETHVKST WVPAAKRRER QEKLAALQTQ HQLHLHGDNN PKRHRDYNPT SSSSLACTLI 180 PNNTSGLEIG NFPAELNSPA VFRCVRVSST DESDDQYAYQ TAVNIGGHVF KGILYDQGPE 240 TNYIPPAETS SGGGGGGGGG SSSGVQPLNF ITGATDATTA SGGSSAALPL LDPSSLYSTP 300 LNSFMAGTQF FLPPRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 1e-73 | SRS family protein |