PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977970.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 231aa MW: 26133.2 Da PI: 9.7578

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.8	2.5e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+ELS+LCdaeva+iifss+gk ye++s XP_022977970.1 10 RIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAS 59 8***********************************************86 PP
2	K-box	70.4	5.5e-24	84	167	15	98
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++e++ L++++ nLq+++R+l+Ge+L Ls+k+L++Le+qLe sl++iR kK+++l+++i+el +k ++++n +L +k+ XP_022977970.1 84 SDVKKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKV 167 56789***************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELSILCD AEVALIIFSS SGKQYEFAST 60 SIESVIEKYN RRKEEDELLL NPISDVKKEV SGLRQQLLNL QENNRKLMGE QLYGLSIKDL 120 NSLESQLEFS LQSIRIKKEQ ILHDEIKELN RKGILMHQQN VELANKVNLF CQENMELHRK 180 VYGHDSRLEM SVATGNPLIP YGIISAAAAG PIGGDAGLRV PIHLQLSPRE Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-63	MIKC_MADS family protein