PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022977969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 26560.7 Da PI: 9.7578 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.8 | 2.6e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+ELS+LCdaeva+iifss+gk ye++s XP_022977969.1 10 RIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 74.5 | 2.9e-25 | 85 | 170 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + +q+e++ L++++ nLq+++R+l+Ge+L Ls+k+L++Le+qLe sl++iR kK+++l+++i+el +k ++++n +L +k+ XP_022977969.1 85 DVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKV 170 5678******************************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELSILCD AEVALIIFSS SGKQYEFAST 60 SIESVIEKYN RRKEEDELLL NPISDVKLWQ KEVSGLRQQL LNLQENNRKL MGEQLYGLSI 120 KDLNSLESQL EFSLQSIRIK KEQILHDEIK ELNRKGILMH QQNVELANKV NLFCQENMEL 180 HRKVYGHDSR LEMSVATGNP LIPYGIISAA AAGPIGGDAG LRVPIHLQLS PREQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-68 | MIKC_MADS family protein |