PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022977870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 346aa MW: 40417.3 Da PI: 4.9298 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178 | 2.5e-55 | 10 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_022977870.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 103 69****************************.9***************953543344677************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_022977870.1 104 YD-KNKLMGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 139 **.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLM GMRKTLVFYR 120 GRAPNGQKTD WIMHEYRLES DENSPPQEEG WVVCRAFKKR TTGQSKTTVE QWDSSYFYDE 180 PIGVSSAIDP LEFISRKPPP QGLLEHNNIM CKQEMEAENV KLLQYNDPFL QLPQLESSSL 240 PLVKRSSSIS LLSDCYEEEY QPTKRRNNNN MSKVTDWRAL DKFVASQLSQ EEAFEGEGDS 300 RFGAQNNSDN HNSVDMAILL MQNRVDDEEN MYKGFLSSNL ESNMYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 1e-125 | NAC family protein |