PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977869.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 346aa MW: 40417.3 Da PI: 4.9298

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.5e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_022977869.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 103 69**************************.9***********953543344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_022977869.1 104 YD-KNKLMGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 139 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLM GMRKTLVFYR 120 GRAPNGQKTD WIMHEYRLES DENSPPQEEG WVVCRAFKKR TTGQSKTTVE QWDSSYFYDE 180 PIGVSSAIDP LEFISRKPPP QGLLEHNNIM CKQEMEAENV KLLQYNDPFL QLPQLESSSL 240 PLVKRSSSIS LLSDCYEEEY QPTKRRNNNN MSKVTDWRAL DKFVASQLSQ EEAFEGEGDS 300 RFGAQNNSDN HNSVDMAILL MQNRVDDEEN MYKGFLSSNL ESNMYY

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW  60
IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLM GMRKTLVFYR  120
GRAPNGQKTD WIMHEYRLES DENSPPQEEG WVVCRAFKKR TTGQSKTTVE QWDSSYFYDE  180
PIGVSSAIDP LEFISRKPPP QGLLEHNNIM CKQEMEAENV KLLQYNDPFL QLPQLESSSL  240
PLVKRSSSIS LLSDCYEEEY QPTKRRNNNN MSKVTDWRAL DKFVASQLSQ EEAFEGEGDS  300
RFGAQNNSDN HNSVDMAILL MQNRVDDEEN MYKGFLSSNL ESNMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-125	NAC family protein