PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022977563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 299aa MW: 31888.1 Da PI: 9.9602 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59 | 1e-18 | 5 | 50 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l +v+++G+++W++I++ ++ gR++k+c++rw + XP_022977563.1 5 KGPWSPEEDDALRGLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 50 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 52.1 | 1.5e-16 | 59 | 101 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++ +G++ W+tIar + gRt++ +k++w++ XP_022977563.1 59 PFSPEEDETIIRAHANFGNR-WATIARLLY-GRTDNAVKNHWNST 101 89******************.********9.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MDRIKGPWSP EEDDALRGLV QKHGPRNWSL ISKSIPGRSG KSCRLRWCNQ LSPQVEHRPF 60 SPEEDETIIR AHANFGNRWA TIARLLYGRT DNAVKNHWNS TLKRKCSSMM NEGFEADPNS 120 QPMKKSVSAG AAVNGLYMNP GSPSGSDISD SSVPVMSPTV YRPVARTGSV IPPGESALSP 180 ATDLATSLSL SLPGASGVGN GLYRSGSGST AQAPLMAAFA QIQSMAASEL TKAAQLDTRG 240 GGGAHEKKNG LGVFSADLMA VMQEMIKSEV KSYMEGMSEK RGRGCFQQAK AGGIRNVGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 4e-82 | MYB family protein |