PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977284.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 559aa MW: 62344.2 Da PI: 4.3972

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.9	1.6e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+kv+gk+++l + i+ +diyk+ePwdLp k k+k+++ ewyfFs d+ky +++r+nrat++gyWk+tgkd++v XP_022977284.1 9 LAPGFRFHPTDEELVSYYLKRKVSGKPFRL-DPISVIDIYKSEPWDLPgKsKLKTRDLEWYFFSALDRKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579*************************.89***********5347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++vg+kktLv++ grap+g +t+Wvmhey+l XP_022977284.1 103 H-NAKTVGMKKTLVYHIGRAPRGARTNWVMHEYKL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRLDP ISVIDIYKSE PWDLPGKSKL 60 KTRDLEWYFF SALDRKYGNS SRTNRATEKG YWKTTGKDRP VRHNAKTVGM KKTLVYHIGR 120 APRGARTNWV MHEYKLTDEE MAKFSIVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE 180 ANEELALVPG DEQVADELLG GRGVHVEGDD FSENVDEGIL SESAPPPPFN FYYGETSNSI 240 EQPDNFIEDD QKAAVGICET SELPDGQTLF VLPDECGLRD RLVKHEYLAE SSNDADEVDA 300 GDVDGRYVLN EPFFSTSDNL SFSDELLLES NELSNPTESD PAAFDVLEEY LTFFDADGEN 360 EDMSFDPSEI LGSDSSVPDQ AVVSEVARDA TEHASSCMRT ADLRHDNEAS SSSIQKPEDP 420 KAESDIKYPF LKHTSHMLGS IPAPFASQFT SKDAGIHLNS APQASSSVRV TAGMIIIRNM 480 ALNGEEVNNL YGKNSDLNFI YLYGIIEGDI DSSQLLPTTG VHSSKSGPLM SRYFMYFFIL 540 FWILILSVSF KVGSCIRSR

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRLDP ISVIDIYKSE PWDLPGKSKL  60
KTRDLEWYFF SALDRKYGNS SRTNRATEKG YWKTTGKDRP VRHNAKTVGM KKTLVYHIGR  120
APRGARTNWV MHEYKLTDEE MAKFSIVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE  180
ANEELALVPG DEQVADELLG GRGVHVEGDD FSENVDEGIL SESAPPPPFN FYYGETSNSI  240
EQPDNFIEDD QKAAVGICET SELPDGQTLF VLPDECGLRD RLVKHEYLAE SSNDADEVDA  300
GDVDGRYVLN EPFFSTSDNL SFSDELLLES NELSNPTESD PAAFDVLEEY LTFFDADGEN  360
EDMSFDPSEI LGSDSSVPDQ AVVSEVARDA TEHASSCMRT ADLRHDNEAS SSSIQKPEDP  420
KAESDIKYPF LKHTSHMLGS IPAPFASQFT SKDAGIHLNS APQASSSVRV TAGMIIIRNM  480
ALNGEEVNNL YGKNSDLNFI YLYGIIEGDI DSSQLLPTTG VHSSKSGPLM SRYFMYFFIL  540
FWILILSVSF KVGSCIRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-143	NAC family protein