PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976535.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 362aa MW: 40117.8 Da PI: 7.6325

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.9	2.7e-55	22	150	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s XP_022976535.1 22 LPPGFRFHPTDEELITYYLLKKVIDSSFSG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSV 115 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_022976535.1 116 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 150 45677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MDVSSFSRYD SAAAADHHPH HLPPGFRFHP TDEELITYYL LKKVIDSSFS GRAIAEVDLN 60 KCEPWELPEK AKMGEKEWYF FSLRDRKYPT GLRTNRATEA GYWKATGKDR EIYSVKTCSL 120 VGMKKTLVFY RGRAPKGEKS NWVMHEYRLE GKFAYHYLST NSKDEWVISR VFQXSGTGVG 180 GGVDGGGGSR KPRFIPGTVS VYPEPSSPSS VSLPPLLDSS LYSAPVAATA VSGNITDRES 240 FSYNSPREHV SCFSTTTGGS FNIPSYDFAT PPPLLAAVDP SPRFHRNMGL SAFPSLRSLQ 300 ENLQLPFFYS PVNLPSPPPP PLHHGNIPSS TDVVACNSAG NWAVSDEPRS MNSTELDCMW 360 SY

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MDVSSFSRYD SAAAADHHPH HLPPGFRFHP TDEELITYYL LKKVIDSSFS GRAIAEVDLN  60
KCEPWELPEK AKMGEKEWYF FSLRDRKYPT GLRTNRATEA GYWKATGKDR EIYSVKTCSL  120
VGMKKTLVFY RGRAPKGEKS NWVMHEYRLE GKFAYHYLST NSKDEWVISR VFQXSGTGVG  180
GGVDGGGGSR KPRFIPGTVS VYPEPSSPSS VSLPPLLDSS LYSAPVAATA VSGNITDRES  240
FSYNSPREHV SCFSTTTGGS FNIPSYDFAT PPPLLAAVDP SPRFHRNMGL SAFPSLRSLQ  300
ENLQLPFFYS PVNLPSPPPP PLHHGNIPSS TDVVACNSAG NWAVSDEPRS MNSTELDCMW  360
SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	9e-97	NAC family protein