PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022976001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 24811.5 Da PI: 8.6328 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 38 | 83 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v ++G+++W++I+r++ gR++k+c++rw + XP_022976001.1 38 KGPWSAEEDRVLTRLVDRYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 83 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.3e-17 | 92 | 134 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022976001.1 92 PFSQAEDDAIIAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 134 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDIQNSSYSS STSDSSSSDS SHSGKPSPPN SAVPDKIKGP WSAEEDRVLT RLVDRYGPRN 60 WSLISRYVKG RSGKSCRLRW CNQLCPGVEH HPFSQAEDDA IIAAHARYGN RWATIARLLP 120 GRTDNAVKNH WNSTLKRRVR NDRKSAGNRT SDMGGGSLLG VNDDPLTELT LATPGMDAGG 180 DVAVECDRRR ESMPAGFWEA MRDVVAREVR EYMTTTFSEN PGFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 3e-55 | MYB family protein |