PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022975997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 211aa MW: 24034.4 Da PI: 9.3758 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.9 | 1.1e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKAeEL +LCda+v viifsst+klyeyss XP_022975997.1 10 RIDNSTSRQVTFSKRRSGLLKKAEELAILCDADVGVIIFSSTNKLYEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 78.6 | 1.6e-26 | 80 | 163 | 8 | 91 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 +++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k ++++n XP_022975997.1 80 GNSTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSAKDLQNLENQLEISLRGIRMKKEKILMDEIQDLNRKVYGTKDAN 163 3788999********************************************************************987777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGRCKIVIRR IDNSTSRQVT FSKRRSGLLK KAEELAILCD ADVGVIIFSS TNKLYEYSSS 60 SMKTLIERYN KTKEEHHQLG NSTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSA 120 KDLQNLENQL EISLRGIRMK KEKILMDEIQ DLNRKVYGTK DANGAHISSL TNGLSVGEDA 180 GIPIDLQLSQ PQPQDHEAPE RATKLGRLQL R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-83 | MIKC_MADS family protein |