PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022974639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 268aa MW: 30494.2 Da PI: 7.1836 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.5e-20 | 88 | 137 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrd + r +r++lg+++t+eeAa +++a+ +l+g XP_022974639.1 88 KFRGVRRRP-WGKWAAEIRDpF-----RrTRVWLGTYDTPEEAAVVYDQAAVRLKG 137 89*******.**********66.....45************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRVCSGGIR FREIRTTTHK PATETKLVRI SFTDGDATDS SSGEDEETIS IRHVKRHVTE 60 IRLLTRSSKK SPLKSGADPL RNSKCHRKFR GVRRRPWGKW AAEIRDPFRR TRVWLGTYDT 120 PEEAAVVYDQ AAVRLKGPNA LTNFAEAPNS KSTVATHFTP PPLAVALAVA ISDREESRSL 180 CSPTSVLRLE EQIWRPIEHV SEESALEMEL NWLYDRNSNS LLFNSRSPQP INSDEMEDFG 240 DIPMDFESCK WDVENYFQDP TFSISLTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-40 | ERF family protein |