PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022974116.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 177aa MW: 20336.1 Da PI: 9.1859 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.1 | 1.3e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien +nrqvtfskRrng+lKKA+ELSvLC+aeva+iifsstgkl e++s XP_022974116.1 10 RIENATNRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSTGKLCEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 70.1 | 6.9e-24 | 85 | 172 | 13 | 100 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++a+L keie+L+ ++R+llG++L+s s++eLqq+eqqL++sl ++R++K+e ++eqi++l++kek l en++L kk +e XP_022974116.1 85 HHHDQADQAANLLKEIESLEDSKRKLLGQGLGSSSYEELQQIEQQLQSSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKTDE 172 5666678899**************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MVRGKTQMRR IENATNRQVT FSKRRNGLLK KAFELSVLCE AEVALIIFSS TGKLCEFASS 60 SMQATVERFQ RHTRVTHHLE RSLPHHHDQA DQAANLLKEI ESLEDSKRKL LGQGLGSSSY 120 EELQQIEQQL QSSLAHVRAT KHEAYKEQID QLKEKEKYLA AENEKLAKKT DEVKCIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 3e-61 | MIKC_MADS family protein |