PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973896.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 305aa    MW: 34564.8 Da    PI: 5.1211
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.6e-121257146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W  eEde l++ vk++G+++W++I ++  + Rt+k+c++rw +
   XP_022973896.1 12 KGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVN 57
                     79*************************8887799**********87 PP
2Myb_DNA-binding47.54.2e-1568107344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      ++T+eE+ + +++ +q+G++ W++Ia +++ gRt++++k++w
   XP_022973896.1  68 KFTAEEERIVIELQAQFGNK-WAKIATYLP-GRTDNDVKNFW 107
                      79******************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEESGSQEAL RKGPWKLEED EVLLNHVKRF GPRDWSSIRS KGLLQRTGKS CRLRWVNKLR  60
PNLKNGCKFT AEEERIVIEL QAQFGNKWAK IATYLPGRTD NDVKNFWSSR QKRLARLLQN  120
STTPSKLQRS TRKEKPVDFD VPSMEAPKLS SASDGDASSR PMSCSSSFSA DNAEAVDMFC  180
SLPDLYRPKL LGFGQDFLQP EFNPFPITIK SDPQTNFHPL PLGSTFSSQG LLHDPNIDIF  240
LEPLDVSQLD NEVQFPFGLQ FYEPMGRCSS HDVVSENVEN PESFFNEFPA DILDQIELLS  300
SSPEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.13e-74MYB family protein