PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973841.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 226aa MW: 25043.1 Da PI: 9.1311

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++++k++G g W++ + g+ R++k+c++rw +yl XP_022973841.1 14 KGAWTKEEDQRLINYIKLHGDGGWRSLPTAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	57.8	2.6e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++TteE el+v+++ +lG++ W+ Ia++++ gRt++++k++w+++ XP_022973841.1 67 RGNFTTEENELIVNLHSLLGNK-WSQIAAKLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MGRSPCCEKQ HTNKGAWTKE EDQRLINYIK LHGDGGWRSL PTAAGLLRCG KSCRLRWINY 60 LRPNLKRGNF TTEENELIVN LHSLLGNKWS QIAAKLPGRT DNEIKNYWNT HIKRKLYSQG 120 IDPRTHRPLV NKGSTCLTRE VEDSNSNSSG SCLTTEVEEN HELNLNLELS IGLHSHNPTT 180 KSPGGGGGGG GGGGSCFSPI LSTTDRIRNG NFLLQPHLFT CYTSSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-79	MYB family protein