PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973142.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 358aa MW: 40774.1 Da PI: 8.7705

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.7	8.1e-48	22	140	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrF+Ptdeel+++yLkkk++g + ++ e+i+ev+iyk+ePwdLp ++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_022973142.1 22 MFPGFRFSPTDEELISFYLKKKLDGYEKSV-EIIAEVEIYKYEPWDLP------DNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS- 108 579**********************999.99**********9......68**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +++++g+k+tLvf++grapkge+t+W+mhey+ XP_022973142.1 109 GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 140 99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAAASENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY 60 KYEPWDLPDN EWFFFSPRGK KYPNGNQTRR ATDLGYWKAT GKERNVKSGS NVIGTKRTLV 120 FHTGRAPKGE RTEWIMHEYN KDKAQDFLVV CRLRRNNEFR QHSSSNRASC SQMNLSSLQA 180 HSGEQVDSTS ESNQKDAAEA ALVECSDGQK DYGSDDFYSD ILKDDIINLD TAPYNAASDL 240 MPLDFHRSDT TRESQTEAND GLEWLPSQGF ANRRIRLKRR EATKAKKLDA VKIGGSRYKV 300 EKVRFSSLEL WRSRLMNTAS SISIFGCYVR VVVISFLLIL IALFMSRLEV FGMPKGLY

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAAASENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY  60
KYEPWDLPDN EWFFFSPRGK KYPNGNQTRR ATDLGYWKAT GKERNVKSGS NVIGTKRTLV  120
FHTGRAPKGE RTEWIMHEYN KDKAQDFLVV CRLRRNNEFR QHSSSNRASC SQMNLSSLQA  180
HSGEQVDSTS ESNQKDAAEA ALVECSDGQK DYGSDDFYSD ILKDDIINLD TAPYNAASDL  240
MPLDFHRSDT TRESQTEAND GLEWLPSQGF ANRRIRLKRR EATKAKKLDA VKIGGSRYKV  300
EKVRFSSLEL WRSRLMNTAS SISIFGCYVR VVVISFLLIL IALFMSRLEV FGMPKGLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	281	RRIRLKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	6e-86	NAC family protein