PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973141.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 365aa MW: 41501.9 Da PI: 8.9759

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.2	8e-50	22	147	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLkkk++g + ++ e+i+ev+iyk+ePwdLp k++ ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_022973141.1 22 MFPGFRFSPTDEELISFYLKKKLDGYEKSV-EIIAEVEIYKYEPWDLPaKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS 115 579**********************999.99***********767778899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++g+k+tLvf++grapkge+t+W+mhey+ XP_022973141.1 116 -GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 147 .99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MAAASENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY 60 KYEPWDLPAK SIIQSDNEWF FFSPRGKKYP NGNQTRRATD LGYWKATGKE RNVKSGSNVI 120 GTKRTLVFHT GRAPKGERTE WIMHEYNKDK AQDFLVVCRL RRNNEFRQHS SSNRASCSQM 180 NLSSLQAHSG EQVDSTSESN QKDAAEAALV ECSDGQKDYG SDDFYSDILK DDIINLDTAP 240 YNAASDLMPL DFHRSDTTRE SQTEANDGLE WLPSQGFANR RIRLKRREAT KAKKLDAVKI 300 GGSRYKVEKV RFSSLELWRS RLMNTASSIS IFGCYVRVVV ISFLLILIAL FMSRLEVFGM 360 PKGLY

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MAAASENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY  60
KYEPWDLPAK SIIQSDNEWF FFSPRGKKYP NGNQTRRATD LGYWKATGKE RNVKSGSNVI  120
GTKRTLVFHT GRAPKGERTE WIMHEYNKDK AQDFLVVCRL RRNNEFRQHS SSNRASCSQM  180
NLSSLQAHSG EQVDSTSESN QKDAAEAALV ECSDGQKDYG SDDFYSDILK DDIINLDTAP  240
YNAASDLMPL DFHRSDTTRE SQTEANDGLE WLPSQGFANR RIRLKRREAT KAKKLDAVKI  300
GGSRYKVEKV RFSSLELWRS RLMNTASSIS IFGCYVRVVV ISFLLILIAL FMSRLEVFGM  360
PKGLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	288	RRIRLKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	2e-90	NAC family protein