PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972936.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 561aa MW: 63086.4 Da PI: 4.7385

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.6	1.8e-51	16	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdee++ +yLk+k+ g++++l +++ ++d+yk+eP++Lp k+k+++++w+fFs+rd+ky++g r+nrat++gyWk+tgkd++v++ XP_022972936.1 16 PPGFRFHPTDEEIILYYLKRKICGRRIRL-DIVGDIDVYKWEPEELPglYKLKTGDRQWFFFSPRDRKYPHGARSNRATRHGYWKTTGKDRTVTC 109 9**************************.99***********6449999************************************* PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktL+fy+grap+ge+tdWvmhey++ XP_022972936.1 110 -NSRNVGVKKTLIFYRGRAPSGERTDWVMHEYTM 142 .999**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MELFCRSSAG EDKAFPPGFR FHPTDEEIIL YYLKRKICGR RIRLDIVGDI DVYKWEPEEL 60 PGLYKLKTGD RQWFFFSPRD RKYPHGARSN RATRHGYWKT TGKDRTVTCN SRNVGVKKTL 120 IFYRGRAPSG ERTDWVMHEY TMTEEELGRC INVKNYYAVY KVFKKSGPGP KNGEQYGAPF 180 KEEDWVDDEF CDFNFDDKEK PAEKPNTDTT VTESENRHMT HFSLDDLDIF MIQLSNEALL 240 EFPEADPCAN SLHQDGRQEE SGSPVVDLCL QEHNLPRSVE LSSSEQQPSN VPESIDLTKS 300 DRPFQTPEAK SSPNLSELTS FLFEDDFLEI DDLGGPEFNL STEKRSGTGN LQFEELNGLC 360 NLDQFHDAAM FLNDMGPLEY GTIPNLSQNE NVDILANPLD VQFQSNPNCA SANQIDNQML 420 IPDLALQDGF ALSELSQTSG VLCDPSNQNE VGKDVSSASR VSSALWAFVE SIPSTPASAA 480 ENGLVNRSFD RISSFGRKRV STNSTMVSAI DSSSIIVSSS RRTASRSKKG GFFVFSVLGA 540 LCAILWVFIG AVRLWHRCIS L

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MELFCRSSAG EDKAFPPGFR FHPTDEEIIL YYLKRKICGR RIRLDIVGDI DVYKWEPEEL  60
PGLYKLKTGD RQWFFFSPRD RKYPHGARSN RATRHGYWKT TGKDRTVTCN SRNVGVKKTL  120
IFYRGRAPSG ERTDWVMHEY TMTEEELGRC INVKNYYAVY KVFKKSGPGP KNGEQYGAPF  180
KEEDWVDDEF CDFNFDDKEK PAEKPNTDTT VTESENRHMT HFSLDDLDIF MIQLSNEALL  240
EFPEADPCAN SLHQDGRQEE SGSPVVDLCL QEHNLPRSVE LSSSEQQPSN VPESIDLTKS  300
DRPFQTPEAK SSPNLSELTS FLFEDDFLEI DDLGGPEFNL STEKRSGTGN LQFEELNGLC  360
NLDQFHDAAM FLNDMGPLEY GTIPNLSQNE NVDILANPLD VQFQSNPNCA SANQIDNQML  420
IPDLALQDGF ALSELSQTSG VLCDPSNQNE VGKDVSSASR VSSALWAFVE SIPSTPASAA  480
ENGLVNRSFD RISSFGRKRV STNSTMVSAI DSSSIIVSSS RRTASRSKKG GFFVFSVLGA  540
LCAILWVFIG AVRLWHRCIS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-128	NAC family protein