PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972917.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 250aa MW: 28375.9 Da PI: 9.0129

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++q+G+g+W+++++ g+ R+ k+c++rw +yl XP_022972917.1 14 KGPWTPEEDIILVSYIHQHGPGNWRSVPNNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	47.3	4.7e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ E++ ++++ ++lG++ W++Ia++++ +Rt++++k++w+++l XP_022972917.1 67 RGQFSDHEEKMIIHLQALLGNR-WAAIASYLP-RRTDNDIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MGRPPCCQTI SVKKGPWTPE EDIILVSYIH QHGPGNWRSV PNNTGLLRCS KSCRLRWTNY 60 LRPGIKRGQF SDHEEKMIIH LQALLGNRWA AIASYLPRRT DNDIKNYWNT HLKKKLKVYE 120 NGLSKGQWER RVQTDIQTAK QALTEAISLT KQTHNSESNT SSCSSYALSA ENIARLLKNW 180 TKNSTRTNSE STTTQNCVSV DESSKLETDL ESVGGLPLTL LETWLFDDGA PQNHQHLINF 240 SLQDGHQGLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-90	MYB family protein