PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 343aa MW: 38265.5 Da PI: 8.6784 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.8e-16 | 95 | 144 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ ++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022972668.1 95 SQYRGVTCYRRTGRWESHIWD------NgKQVYLGGFDTAHSAARAYDRAAIKFRG 144 78****99999**********......44************************997 PP | |||||||
2 | AP2 | 45.4 | 2e-14 | 187 | 237 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k +grW+A+ +s g +k+++lg f+++ eAa+a+++a+ k +g XP_022972668.1 187 SKYRGVTLHK-SGRWEARMGQFS--G-KKYVYLGLFDSEVEAARAYDKAAIKHNG 237 89********.7******77753..2.6**********99**********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MLDLNLCILS GDSASASGSG SADHSNTTAD EDFSSNVNSG FTFSFSILNN NGTEDQLDRT 60 ALFHPVAGVC SQRKWLDQSV KPVKKGRRGP KSRSSQYRGV TCYRRTGRWE SHIWDNGKQV 120 YLGGFDTAHS AARAYDRAAI KFRGVHADIN FDISDYREEI KEMRNLSKEE FVHILRRQSN 180 GFSRGSSKYR GVTLHKSGRW EARMGQFSGK KYVYLGLFDS EVEAARAYDK AAIKHNGREA 240 VTNFDQSCYY GMEIAFESES HGDIDLSLGI APPCPPEHQT DNRVGRSQPP TVEHPHSLSS 300 PPQQHHQDSL LLPPSPRHLP PASPFLRYHI PPSISAASNR LLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 2e-88 | AP2 family protein |