PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972667.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 354aa MW: 39402.8 Da PI: 8.3725

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	95	144	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ ++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022972667.1 95 SQYRGVTCYRRTGRWESHIWD------NgKQVYLGGFDTAHSAARAYDRAAIKFRG 144 78**99999******......44**********************997 PP
2	AP2	45.3	2.1e-14	198	248	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k +grW+A+ +s g +k+++lg f+++ eAa+a+++a+ k +g XP_022972667.1 198 SKYRGVTLHK-SGRWEARMGQFS--G-KKYVYLGLFDSEVEAARAYDKAAIKHNG 248 89******.7**77753..2.6******99********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MLDLNLCILS GDSASASGSG SADHSNTTAD EDFSSNVNSG FTFSFSILNN NGTEDQLDRT 60 ALFHPVAGVC SQRKWLDQSV KPVKKGRRGP KSRSSQYRGV TCYRRTGRWE SHIWDNGKQV 120 YLGGFDTAHS AARAYDRAAI KFRGVHADIN FDISDYREEI KELCFGASMA DLQMRNLSKE 180 EFVHILRRQS NGFSRGSSKY RGVTLHKSGR WEARMGQFSG KKYVYLGLFD SEVEAARAYD 240 KAAIKHNGRE AVTNFDQSCY YGMEIAFESE SHGDIDLSLG IAPPCPPEHQ TDNRVGRSQP 300 PTVEHPHSLS SPPQQHHQDS LLLPPSPRHL PPASPFLRYH IPPSISAASN RLLL

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MLDLNLCILS GDSASASGSG SADHSNTTAD EDFSSNVNSG FTFSFSILNN NGTEDQLDRT  60
ALFHPVAGVC SQRKWLDQSV KPVKKGRRGP KSRSSQYRGV TCYRRTGRWE SHIWDNGKQV  120
YLGGFDTAHS AARAYDRAAI KFRGVHADIN FDISDYREEI KELCFGASMA DLQMRNLSKE  180
EFVHILRRQS NGFSRGSSKY RGVTLHKSGR WEARMGQFSG KKYVYLGLFD SEVEAARAYD  240
KAAIKHNGRE AVTNFDQSCY YGMEIAFESE SHGDIDLSLG IAPPCPPEHQ TDNRVGRSQP  300
PTVEHPHSLS SPPQQHHQDS LLLPPSPRHL PPASPFLRYH IPPSISAASN RLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	2e-85	AP2 family protein