PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 27749.9 Da PI: 4.9666 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 119.7 | 2.6e-37 | 17 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrFhPtdeel+v+yL +++ + +l++ vi+++d +++Pw Lp + ++e yfFs++ k ++g +++t+sgyW+ t +d++v+s+ XP_022972318.1 17 PPGFRFHPTDEELLVQYLMRRAFSLPLPA-PVISDIDGGRFDPWVLPGN---WQRERYFFSTNFPKFPNGGSVTKVTASGYWNPTANDRAVVSSk 107 9***************************9.89***************43...46899**********************************9986 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg kk+Lvfy g+ p g +tdW+mheyrl XP_022972318.1 108 QDQLVGWKKSLVFYVGKFPYGMRTDWIMHEYRL 140 7778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MAANRVAYLK NGVLRFPPGF RFHPTDEELL VQYLMRRAFS LPLPAPVISD IDGGRFDPWV 60 LPGNWQRERY FFSTNFPKFP NGGSVTKVTA SGYWNPTAND RAVVSSKQDQ LVGWKKSLVF 120 YVGKFPYGMR TDWIMHEYRL VDFPPSAMNA QLPPFNPNLV LCRIFFKKRD TREIDENNNV 180 GSRPVLRNFL RATNNTDLNL SPTSSSSSGS SGITDISLGN SDDDDDDDYE EEDEEETSSF 240 YKSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 9e-64 | NAC family protein |