PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972182.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 262aa    MW: 30391.1 Da    PI: 6.7877
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.5e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grW++eEdell ++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_022972182.1 14 KGRWSAEEDELLTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding51.52.3e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++E++ +v  ++ +G++ W++Ia++m+ gRt++++k++w+++l
   XP_022972182.1  67 RGNITADEEQMIVMMHNAFGNR-WSLIAAHMP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MVRAPCCEKV GLKKGRWSAE EDELLTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRRDLKRGNI TADEEQMIVM MHNAFGNRWS LIAAHMPGRT DNEIKNYWNS HLSRRIYTVT  120
RPSAKSTSPI TGILDISPTP KRRKNMTDRA SRQQTNAIEG KTIPPHIEKE EKEEGLSSKH  180
SKEGEDLGPY DWLDGEIERL NNDFEWNKSN EKMAFEDDLQ NGERSSSSSM NSALEMDQWL  240
NFDWELHKIS SWLWESEIDR CI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.11e-79MYB family protein