PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971946.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 23764.2 Da    PI: 8.228
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.34.2e-23959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqv fskRr+g++KKA+EL +LCdae+ +++fs +gkl++y+s
  XP_022971946.1  9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS 59
                    689**********************************************86 PP
2K-box27.31.5e-10931692096
           K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                       akL++e+e+ ++e+R+++Ge+L+ L l+eL++Le+ L  +l+++ +  +    e i +  +k + l een++L++
  XP_022971946.1  93 IRAKLNEEVEKKRHELRQMKGEELQGLGLEELKKLEKSLLGGLSRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQ 169
                     458*******************************************9998888888888888888888888888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLLVFSA SGKLFDYASS  60
SVQGLLEKHS SVHSENLPNL NEPSVEFQLE SNIRAKLNEE VEKKRHELRQ MKGEELQGLG  120
LEELKKLEKS LLGGLSRVAE MMDGRNAELI CDIGRKVDLL IEENQRLNQL KVEKMAYQTH  180
NMQGHSSESI VNNSQDYDSS DTSLKLGLAP E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.19e-46MIKC_MADS family protein