PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022971944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 23952.4 Da PI: 7.6688 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 72.2 | 4.3e-23 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqv fskRr+g++KKA+EL +LCdae+ +++fs +gkl++y+s XP_022971944.1 9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS 59 689**********************************************86 PP | |||||||
2 | K-box | 27.7 | 1.2e-10 | 93 | 171 | 20 | 98 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 akL++e+e+ ++e+R+++Ge+L+ L l+eL++Le+ L +l+++ + + e i + +k + l een++L++ + XP_022971944.1 93 IRAKLNEEVEKKRHELRQMKGEELQGLGLEELKKLEKSLLGGLSRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLV 171 458********************************************99999999999999999999999999998866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLLVFSA SGKLFDYASS 60 SVQGLLEKHS SVHSENLPNL NEPSVEFQLE SNIRAKLNEE VEKKRHELRQ MKGEELQGLG 120 LEELKKLEKS LLGGLSRVAE MMDGRNAELI CDIGRKVDLL IEENQRLNQL VEKMAYQTHN 180 MQGHSSESIV NNSQDYDSSD TSLKLGLSFL EH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 8e-46 | MIKC_MADS family protein |